Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diguanylate cyclase/phosphodiesterase | VEIS_RS15705 | Not Available | Positive | 3604401 - 3606956 | 94796.7 |
| polyhydroxyalkanoate synthesis repressor phar | VEIS_RS15710 | P45373 | Positive | 3607208 - 3607741 | 20091.6 |
| 30s ribosomal protein s12 methylthiotransferase rimo | VEIS_RS15715 | A1WMV5 | Positive | 3607813 - 3609201 | 50127.1 |
| elongation factor p | VEIS_RS15720 | A1WMV6 | Negative | 3609205 - 3609759 | 20514.7 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS15725 | O30446 | Negative | 3610196 - 3611146 | 32742.3 |
| hydroxymethylglutaryl-coa lyase | VEIS_RS15730 | O34873 | Negative | 3611206 - 3612150 | 33437.6 |
| caib/baif coa-transferase family protein | VEIS_RS15735 | Q7CXU0 | Negative | 3612143 - 3613294 | 41519.9 |
| gtpase era | VEIS_RS15740 | Q8Y0I0 | Negative | 3613413 - 3614435 | 37384.1 |
| ribonuclease iii family protein | VEIS_RS15745 | A1WMW1 | Negative | 3614432 - 3615175 | 26872.2 |
| duf4845 domain-containing protein | VEIS_RS15750 | Not Available | Negative | 3615176 - 3615532 | 13049.0 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
