Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | VEIS_RS01580 | Q2YK58 | Negative | 361268 - 362380 | 39932.0 |
| iclr family transcriptional regulator | VEIS_RS01585 | P16528 | Positive | 362613 - 363395 | 28702.8 |
| coa pyrophosphatase | VEIS_RS01590 | Q7N3M0 | Positive | 363718 - 364449 | 26632.1 |
| cobd/cbib family protein | VEIS_RS01595 | A4VJ38 | Positive | 364504 - 365490 | 36131.8 |
| ribosome small subunit-dependent gtpase a | VEIS_RS01600 | C5CSN3 | Negative | 365510 - 366454 | 33714.6 |
| 4a-hydroxytetrahydrobiopterin dehydratase | VEIS_RS01605 | A1TND7 | Negative | 366495 - 366830 | 12245.4 |
| m48 family metallopeptidase | VEIS_RS01610 | Q8RX88 | Negative | 366830 - 368134 | 47031.6 |
| hypothetical protein | VEIS_RS25180 | Not Available | Negative | 368101 - 368325 | 8156.19 |
| oligoribonuclease | VEIS_RS01620 | A1TND9 | Positive | 368416 - 369003 | 21922.5 |
| dead/deah box helicase | VEIS_RS01625 | Not Available | Positive | 369311 - 371116 | 64635.3 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
