Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome | VEIS_RS15665 | P95339 | Negative | 3594350 - 3594655 | 10583.2 |
| tigr04438 family trp-rich protein | VEIS_RS15670 | Not Available | Positive | 3594805 - 3595047 | 9667.82 |
| dihydroxy-acid dehydratase | VEIS_RS15675 | A1WMU5 | Negative | 3595172 - 3596878 | 59762.1 |
| hypothetical protein | VEIS_RS30650 | Not Available | Positive | 3597312 - 3597530 | 7601.33 |
| prolipoprotein diacylglyceryl transferase | VEIS_RS15680 | A1WMU7 | Positive | 3597524 - 3598357 | 30656.1 |
| l-serine ammonia-lyase | VEIS_RS15685 | O86564 | Negative | 3598581 - 3600008 | 49864.1 |
| choline dehydrogenase | VEIS_RS15690 | B2JS89 | Negative | 3600027 - 3601697 | 60977.9 |
| formaldehyde dehydrogenase, glutathione-independent | VEIS_RS15695 | Q9HTE3 | Negative | 3601814 - 3603013 | 41943.6 |
| choline abc transporter substrate-binding protein | VEIS_RS15700 | Q9L4K3 | Negative | 3603054 - 3603962 | 32560.6 |
| hypothetical protein | VEIS_RS31190 | Not Available | Positive | 3604099 - 3604230 | 4218.03 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
