Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urea abc transporter substrate-binding protein | VEIS_RS15625 | Not Available | Negative | 3583944 - 3585206 | 45761.9 |
| duf6806 family protein | VEIS_RS15630 | Not Available | Positive | 3585718 - 3586350 | 23171.0 |
| hypothetical protein | VEIS_RS28880 | Not Available | Positive | 3586316 - 3586501 | 6170.59 |
| glutamate racemase | VEIS_RS15635 | A4XR64 | Negative | 3586636 - 3587541 | 31347.0 |
| fumarate hydratase | VEIS_RS15640 | Q58690 | Negative | 3587525 - 3589075 | 55334.9 |
| class ii fumarate hydratase | VEIS_RS15645 | Q8XQE8 | Positive | 3589244 - 3590650 | 49167.2 |
| tigr00645 family protein | VEIS_RS15650 | P57929 | Negative | 3590836 - 3591435 | 22228.8 |
| hypothetical protein | VEIS_RS26550 | Not Available | Negative | 3591485 - 3591637 | 5546.87 |
| acetate--coa ligase | VEIS_RS15655 | Q46Z41 | Positive | 3591801 - 3593795 | 72029.4 |
| hypothetical protein | VEIS_RS15660 | Not Available | Positive | 3593807 - 3594256 | 16286.1 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
