Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spor domain-containing protein | VEIS_RS15440 | Not Available | Negative | 3536882 - 3537568 | 24880.7 |
| biotin--[acetyl-coa-carboxylase] ligase | VEIS_RS15445 | P06709 | Negative | 3537594 - 3538505 | 31369.8 |
| set domain-containing protein | VEIS_RS15450 | Q4PB36 | Negative | 3538502 - 3539080 | 21417.2 |
| dna topoisomerase iii | VEIS_RS15455 | Q65N90 | Positive | 3539202 - 3541964 | 100825.0 |
| alpha-hydroxy acid oxidase | VEIS_RS15460 | A4XYG7 | Negative | 3541991 - 3543154 | 41943.7 |
| acetoacetate--coa ligase | VEIS_RS15465 | Q9Z3R3 | Negative | 3543370 - 3545457 | 76345.9 |
| lipoprotein-releasing abc transporter atp-binding protein lold | VEIS_RS15470 | Q12ES3 | Negative | 3545586 - 3546290 | 24782.2 |
| lipoprotein-releasing abc transporter permease subunit | VEIS_RS15475 | Q87EF5 | Negative | 3546283 - 3547545 | 44806.6 |
| phosphoglycerate mutase | VEIS_RS15480 | Not Available | Positive | 3547612 - 3548592 | 36402.5 |
| single-stranded-dna-specific exonuclease recj | VEIS_RS15485 | P21893 | Positive | 3548589 - 3550319 | 61643.7 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
