Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoserine/phosphohydroxythreonine transaminase | VEIS_RS15155 | A1TSA3 | Positive | 3467195 - 3468304 | 40405.3 |
| prephenate dehydratase | VEIS_RS15160 | Q9ZHY3 | Positive | 3468380 - 3469477 | 39790.6 |
| prephenate dehydrogenase/arogenate dehydrogenase family protein | VEIS_RS15165 | Q04983 | Positive | 3469490 - 3470392 | 32419.2 |
| bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase | VEIS_RS15170 | B3R368 | Positive | 3470421 - 3472538 | 74405.0 |
| 30s ribosomal protein s1 | VEIS_RS15175 | Q9JZ44 | Positive | 3472706 - 3474394 | 61906.0 |
| integration host factor subunit beta | VEIS_RS15180 | Q8Y0Y3 | Positive | 3474409 - 3474792 | 14019.9 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS26515 | Not Available | Negative | 3474804 - 3475340 | 19635.4 |
| helix-turn-helix domain-containing protein | VEIS_RS15190 | Not Available | Positive | 3475491 - 3475829 | 12535.5 |
| class i sam-dependent dna methyltransferase | VEIS_RS15195 | Q57168 | Positive | 3475841 - 3477397 | 57444.0 |
| restriction endonuclease subunit s | VEIS_RS15200 | P44152 | Positive | 3477387 - 3478637 | 45384.3 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
