Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l20 | VEIS_RS15030 | A1WMG8 | Positive | 3442443 - 3442802 | 13462.8 |
| phenylalanine--trna ligase subunit alpha | VEIS_RS15035 | A1WMG9 | Positive | 3443090 - 3444142 | 38810.3 |
| phenylalanine--trna ligase subunit beta | VEIS_RS15040 | Q8XZ24 | Positive | 3444168 - 3446633 | 89023.7 |
| integration host factor subunit alpha | VEIS_RS15045 | Q12BQ7 | Positive | 3446654 - 3446980 | 11904.5 |
| merr family transcriptional regulator | VEIS_RS15050 | Not Available | Positive | 3447080 - 3447502 | 15899.2 |
| Trna-pro | Not Available | Not Available | Positive | 3447533 - 3447609 | Not Available |
| bluf domain-containing protein | VEIS_RS30620 | Not Available | Negative | 3448025 - 3448426 | 14732.4 |
| hypothetical protein | VEIS_RS30625 | Not Available | Negative | 3448497 - 3448739 | 8721.73 |
| taud/tfda family dioxygenase | VEIS_RS30630 | Not Available | Negative | 3448831 - 3449256 | 15609.6 |
| hypothetical protein | VEIS_RS30635 | Not Available | Negative | 3449263 - 3449436 | 6353.79 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
