Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | VEIS_RS14985 | P17315 | Negative | 3429741 - 3431933 | 78827.1 |
| alpha-hydroxy acid oxidase | VEIS_RS14990 | F4G5A4 | Negative | 3432368 - 3433555 | 41394.8 |
| fe2+-dependent dioxygenase | VEIS_RS14995 | A1WMG0 | Negative | 3433552 - 3434235 | 25720.7 |
| tonb-dependent siderophore receptor | VEIS_RS15000 | Q8X7W7 | Negative | 3434238 - 3436514 | 82444.2 |
| swib/mdm2 domain-containing protein | VEIS_RS15005 | Not Available | Negative | 3436789 - 3437088 | 10494.0 |
| hypothetical protein | VEIS_RS26490 | Not Available | Negative | 3437340 - 3437492 | 5546.87 |
| isocitrate lyase | VEIS_RS15010 | P51066 | Positive | 3437796 - 3439127 | 48491.0 |
| threonine--trna ligase | VEIS_RS15015 | A1WMG5 | Positive | 3439487 - 3441406 | 72143.5 |
| translation initiation factor if-3 | VEIS_RS15020 | Q8XZ28 | Positive | 3441488 - 3442099 | 23066.3 |
| 50s ribosomal protein l35 | VEIS_RS15025 | A1WMG7 | Positive | 3442214 - 3442417 | 7505.52 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
