Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | VEIS_RS01485 | Not Available | Negative | 335266 - 336207 | 34623.3 |
| 4-oxalomesaconate tautomerase | VEIS_RS01490 | P0AAV9 | Positive | 336546 - 337673 | 39426.6 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS01495 | Not Available | Positive | 337707 - 338720 | 35349.8 |
| porin | VEIS_RS01500 | Not Available | Positive | 338790 - 339851 | 36721.2 |
| 3-oxoadipyl-coa thiolase | VEIS_RS01505 | Q43935 | Positive | 340179 - 341384 | 41821.4 |
| threonine ammonia-lyase, biosynthetic | VEIS_RS01510 | P53607 | Negative | 341513 - 343210 | 61509.7 |
| hypothetical protein | VEIS_RS28025 | Not Available | Negative | 343207 - 343380 | 6059.27 |
| excinuclease abc subunit uvra | VEIS_RS01515 | Q56242 | Positive | 343477 - 349494 | 216067.0 |
| smp-30/gluconolactonase/lre family protein | VEIS_RS01520 | Not Available | Negative | 349561 - 350520 | 33492.1 |
| carotenoid oxygenase family protein | VEIS_RS30135 | Not Available | Negative | 350654 - 351109 | 16292.5 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
