Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-d-ribose 1-methylphosphonate 5-phosphate c-p-lyase phnj | VEIS_RS14405 | P16688 | Positive | 3311483 - 3312463 | 36731.5 |
| phosphonate c-p lyase system protein phnk | VEIS_RS14410 | P16678 | Positive | 3312460 - 3313233 | 28478.6 |
| phosphonate c-p lyase system protein phnl | VEIS_RS14415 | P16679 | Positive | 3313230 - 3313955 | 26037.7 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | VEIS_RS14420 | P16689 | Positive | 3313952 - 3315106 | 41337.3 |
| phosphonate abc transporter atp-binding protein | VEIS_RS14425 | Q222W0 | Positive | 3315225 - 3316115 | 31710.8 |
| phosphonate abc transporter substrate-binding protein | VEIS_RS14430 | P16682 | Positive | 3316157 - 3317101 | 34733.5 |
| phosphonate abc transporter, permease protein phne | VEIS_RS14435 | A0A140NFA3 | Positive | 3317143 - 3317943 | 28927.9 |
| gntr family transcriptional regulator | VEIS_RS14440 | Not Available | Negative | 3318121 - 3318828 | 25505.0 |
| cupin domain-containing protein | VEIS_RS14445 | Not Available | Negative | 3319078 - 3319485 | 14671.3 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS14450 | Not Available | Negative | 3319482 - 3320121 | 22540.3 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
