Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | VEIS_RS13990 | Not Available | Negative | 3218000 - 3218758 | 27114.1 |
| abc transporter permease subunit | VEIS_RS13995 | Not Available | Negative | 3218755 - 3220572 | 63538.0 |
| branched-chain amino acid abc transporter permease | VEIS_RS14000 | Not Available | Negative | 3220569 - 3221624 | 36472.9 |
| hypothetical protein | VEIS_RS28780 | Not Available | Negative | 3221621 - 3221830 | 6550.85 |
| sdr family oxidoreductase | VEIS_RS14005 | P0A2D0 | Negative | 3221844 - 3222584 | 25437.0 |
| hypothetical protein | VEIS_RS29765 | Not Available | Negative | 3222603 - 3222746 | 4515.4 |
| marr family winged helix-turn-helix transcriptional regulator | VEIS_RS14015 | Not Available | Positive | 3223142 - 3223627 | 17827.5 |
| zip family metal transporter | VEIS_RS14020 | Q9V3A4 | Positive | 3223758 - 3224654 | 31327.3 |
| lyttr family dna-binding domain-containing protein | VEIS_RS14025 | P26275 | Negative | 3224767 - 3225528 | 27763.6 |
| trap transporter large permease subunit | VEIS_RS14035 | Q9KQS1 | Negative | 3226054 - 3227775 | 61159.1 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
