Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catechol 2,3-dioxygenase | VEIS_RS13585 | P06622 | Negative | 3136348 - 3137292 | 34922.5 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | VEIS_RS13590 | Not Available | Negative | 3137323 - 3137685 | 12664.4 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit f | VEIS_RS13595 | P19734 | Negative | 3137689 - 3138753 | 38372.8 |
| phenol hydroxylase subunit p4 | VEIS_RS13600 | P19733 | Negative | 3138772 - 3139128 | 13024.5 |
| aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha | VEIS_RS13605 | P19732 | Negative | 3139125 - 3140684 | 60928.8 |
| mmob/dmpm family protein | VEIS_RS13610 | P19731 | Negative | 3140714 - 3140983 | 10024.7 |
| aromatic/alkene monooxygenase hydroxylase subunit beta | VEIS_RS13615 | P19730 | Negative | 3141006 - 3142001 | 36867.8 |
| phenol hydroxylase subunit | VEIS_RS13620 | Not Available | Negative | 3142031 - 3142240 | 8014.53 |
| sigma-54-dependent fis family transcriptional regulator | VEIS_RS13625 | P06519 | Positive | 3142569 - 3144251 | 61617.9 |
| gntr family transcriptional regulator | VEIS_RS13630 | Not Available | Positive | 3144274 - 3145035 | 28216.6 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
