Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VEIS_RS31155 | Not Available | Negative | 3128481 - 3128603 | 4448.81 |
| 2-hydroxymuconate tautomerase | VEIS_RS13540 | Q9RHM8 | Negative | 3128613 - 3128804 | 7085.58 |
| 4-hydroxy-2-oxovalerate aldolase | VEIS_RS13545 | A1WLL2 | Negative | 3128816 - 3129850 | 36790.0 |
| acetaldehyde dehydrogenase (acetylating) | VEIS_RS13550 | A1WLL3 | Negative | 3129864 - 3130775 | 32265.4 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS13555 | Not Available | Negative | 3130790 - 3131938 | 39751.4 |
| 2-oxo-3-hexenedioate decarboxylase | VEIS_RS13560 | P49155 | Negative | 3131974 - 3132762 | 28010.8 |
| 2-oxopent-4-enoate hydratase | VEIS_RS13565 | P23107 | Negative | 3132778 - 3133563 | 27715.6 |
| alpha/beta fold hydrolase | VEIS_RS13570 | P19076 | Negative | 3133586 - 3134437 | 30984.0 |
| 2-hydroxymuconic semialdehyde dehydrogenase | VEIS_RS13575 | P19059 | Negative | 3134434 - 3135888 | 51374.6 |
| heme-binding protein | VEIS_RS13580 | P45517 | Negative | 3135911 - 3136336 | 14367.3 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
