Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VEIS_RS13485 | Not Available | Positive | 3120782 - 3121108 | 11712.2 |
| hypothetical protein | VEIS_RS13490 | Not Available | Negative | 3121118 - 3121453 | 12062.3 |
| pdr/vanb family oxidoreductase | VEIS_RS13495 | Q52186 | Negative | 3121845 - 3122801 | 34071.2 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | VEIS_RS13500 | Not Available | Negative | 3122813 - 3123328 | 18895.7 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS29750 | Not Available | Negative | 3123465 - 3123620 | 5602.93 |
| is3 family transposase | VEIS_RS26315 | P0CF79 | Positive | 3123682 - 3124401 | 27210.6 |
| is4 family transposase | VEIS_RS13515 | Not Available | Negative | 3124604 - 3125914 | 49379.4 |
| hypothetical protein | VEIS_RS13520 | Not Available | Positive | 3126128 - 3126502 | 13675.0 |
| hypothetical protein | VEIS_RS13525 | Not Available | Negative | 3126515 - 3127054 | 19641.8 |
| hypothetical protein | VEIS_RS13535 | Not Available | Negative | 3127378 - 3127602 | 8243.87 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
