Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine deacetylase | VEIS_RS01335 | Q9CLT9 | Negative | 296771 - 297967 | 42673.2 |
| saccharopine dehydrogenase family protein | VEIS_RS01340 | Not Available | Negative | 298313 - 299461 | 40740.1 |
| lrp/asnc family transcriptional regulator | VEIS_RS01345 | Not Available | Positive | 299629 - 300081 | 16107.5 |
| trna dihydrouridine(20/20a) synthase dusa | VEIS_RS01350 | Q8CWK7 | Positive | 300345 - 301367 | 38154.9 |
| polyhydroxyalkanoate depolymerase | VEIS_RS01355 | Not Available | Positive | 301434 - 303047 | 58486.4 |
| rnfabcdge type electron transport complex subunit b | VEIS_RS01360 | A1K5F2 | Positive | 303044 - 303706 | 23128.4 |
| succinyldiaminopimelate transaminase | VEIS_RS01365 | A5FRC5 | Positive | 303808 - 305037 | 44144.8 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | VEIS_RS01370 | C5CLT4 | Positive | 305034 - 305867 | 29052.9 |
| pilt/pilu family type 4a pilus atpase | VEIS_RS01375 | Not Available | Positive | 305907 - 307073 | 42795.8 |
| succinyl-diaminopimelate desuccinylase | VEIS_RS01380 | A1WEL1 | Positive | 307102 - 308307 | 43260.7 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
