Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosome-binding factor rbfa | VEIS_RS13380 | A1WLI2 | Negative | 3094129 - 3094491 | 13301.1 |
| translation initiation factor if-2 | VEIS_RS13385 | A1WLI3 | Negative | 3094495 - 3097467 | 105149.0 |
| transcription termination factor nusa | VEIS_RS13390 | Q83BS0 | Negative | 3097491 - 3098975 | 54660.4 |
| ribosome maturation factor rimp | VEIS_RS26305 | A1WLI5 | Negative | 3099049 - 3099786 | 25224.2 |
| malonyl-coa synthase | VEIS_RS13400 | Not Available | Negative | 3099986 - 3101554 | 56439.9 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS13405 | Not Available | Negative | 3101684 - 3102667 | 34385.2 |
| malonyl-coa decarboxylase | VEIS_RS13410 | Q920F5 | Negative | 3102735 - 3104240 | 55679.8 |
| gntr family transcriptional regulator | VEIS_RS13415 | Not Available | Negative | 3104240 - 3104908 | 24697.9 |
| metal-sensing transcriptional repressor | VEIS_RS13420 | Not Available | Positive | 3105456 - 3105725 | 10018.1 |
| nickel/cobalt efflux protein rcna | VEIS_RS13425 | P76425 | Positive | 3105737 - 3106498 | 26788.1 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
