Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | VEIS_RS13335 | Not Available | Positive | 3084249 - 3084653 | 14442.3 |
| dihydrodipicolinate synthase family protein | VEIS_RS13340 | O69782 | Positive | 3084666 - 3085604 | 33565.3 |
| fad-binding oxidoreductase | VEIS_RS13345 | Not Available | Positive | 3085601 - 3086806 | 41836.1 |
| (2fe-2s)-binding protein | VEIS_RS13350 | Not Available | Positive | 3086829 - 3087089 | 8963.17 |
| fad-dependent oxidoreductase | VEIS_RS13355 | Not Available | Positive | 3087082 - 3088563 | 51979.8 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS30555 | Not Available | Negative | 3088785 - 3089036 | 8622.43 |
| enoyl-coa hydratase/isomerase family protein | VEIS_RS13360 | Q28FR6 | Negative | 3089314 - 3090426 | 40077.9 |
| dmt family transporter | VEIS_RS13365 | Not Available | Negative | 3090423 - 3091298 | 30866.3 |
| translational gtpase typa | VEIS_RS13370 | P0A3B2 | Negative | 3091311 - 3093134 | 66471.9 |
| trna pseudouridine(55) synthase trub | VEIS_RS13375 | A1WLI1 | Negative | 3093131 - 3094126 | 34991.6 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
