Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | VEIS_RS13250 | Not Available | Negative | 3065178 - 3065981 | 29929.5 |
| abc transporter substrate-binding protein | VEIS_RS13255 | Not Available | Negative | 3066036 - 3067361 | 47907.4 |
| branched-chain amino acid abc transporter permease | VEIS_RS13260 | Not Available | Negative | 3067394 - 3068470 | 38928.1 |
| branched-chain amino acid abc transporter permease | VEIS_RS13265 | Not Available | Negative | 3068499 - 3069413 | 32557.3 |
| abc transporter atp-binding protein | VEIS_RS13270 | Not Available | Negative | 3069438 - 3070271 | 30932.9 |
| long-chain fatty acid--coa ligase | VEIS_RS13275 | Q7TYX8 | Negative | 3070268 - 3072232 | 73212.9 |
| hypothetical protein | VEIS_RS28750 | Not Available | Negative | 3072360 - 3072608 | 9087.94 |
| hypothetical protein | VEIS_RS13280 | Not Available | Positive | 3072844 - 3073191 | 12352.4 |
| serine hydrolase | VEIS_RS13285 | A1IHE7 | Positive | 3073394 - 3074557 | 41660.2 |
| succinate--coa ligase subunit alpha | VEIS_RS13290 | P80865 | Negative | 3074618 - 3075514 | 31039.8 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
