Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactitol-1-phosphate 5-dehydrogenase | VEIS_RS13060 | P0A9S4 | Positive | 3026258 - 3027301 | 36759.7 |
| ribulokinase | VEIS_RS13065 | Q96C11 | Positive | 3027411 - 3028916 | 53529.5 |
| sugar-binding transcriptional regulator | VEIS_RS13070 | A6TEB9 | Positive | 3028913 - 3029929 | 36660.1 |
| sugar abc transporter atp-binding protein | VEIS_RS13075 | Q7NTN6 | Positive | 3029926 - 3031443 | 54731.5 |
| abc transporter permease | VEIS_RS13080 | Not Available | Positive | 3031440 - 3032486 | 35679.7 |
| deoxyribose-phosphate aldolase | VEIS_RS13085 | Q9Y315 | Positive | 3032514 - 3033473 | 34310.7 |
| aldehyde dehydrogenase family protein | VEIS_RS13090 | Q571I9 | Positive | 3033527 - 3035923 | 85784.8 |
| nucleotidyl transferase abieii/abigii toxin family protein | VEIS_RS13095 | Not Available | Negative | 3035984 - 3036547 | 21240.6 |
| hypothetical protein | VEIS_RS13100 | Not Available | Negative | 3036540 - 3037151 | 22810.3 |
| hypothetical protein | VEIS_RS13105 | Not Available | Positive | 3037252 - 3037521 | 10285.1 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
