Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | VEIS_RS12955 | P0A960 | Positive | 3004239 - 3005468 | 45312.6 |
| homoserine dehydrogenase | VEIS_RS12960 | P29365 | Positive | 3005581 - 3006915 | 46590.8 |
| threonine synthase | VEIS_RS12965 | P23669 | Positive | 3006941 - 3008491 | 56475.0 |
| molybdopterin-guanine dinucleotide biosynthesis protein b | VEIS_RS12970 | Not Available | Positive | 3008488 - 3009075 | 21544.8 |
| gephyrin-like molybdotransferase glp | VEIS_RS12975 | Q56066 | Positive | 3009060 - 3010358 | 45273.5 |
| moad/this family protein | VEIS_RS12980 | Not Available | Positive | 3010358 - 3010609 | 8660.43 |
| abc transporter substrate-binding protein | VEIS_RS12985 | Not Available | Negative | 3010910 - 3012076 | 41162.8 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | VEIS_RS12990 | Not Available | Negative | 3012118 - 3012582 | 17486.7 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | VEIS_RS30545 | Not Available | Negative | 3012579 - 3012938 | 13408.6 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | VEIS_RS13000 | A8A344 | Negative | 3012935 - 3014260 | 48693.9 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
