Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing sensor histidine kinase | VEIS_RS12815 | P18392 | Negative | 2978204 - 2979445 | 44918.2 |
| response regulator | VEIS_RS12820 | P0AA18 | Negative | 2979573 - 2980292 | 26457.3 |
| ampg family muropeptide mfs transporter | VEIS_RS12825 | Q4ULW4 | Negative | 2980439 - 2981791 | 47613.1 |
| m48 family metallopeptidase | VEIS_RS12830 | Q3SZN3 | Positive | 2981866 - 2982699 | 29795.9 |
| 50s ribosomal protein l13 | VEIS_RS12835 | A1WL74 | Positive | 2982876 - 2983319 | 16094.7 |
| 30s ribosomal protein s9 | VEIS_RS12840 | A1WL75 | Positive | 2983316 - 2983708 | 14287.2 |
| duf6776 family protein | VEIS_RS12845 | Not Available | Positive | 2983786 - 2984508 | 26677.8 |
| polymer-forming cytoskeletal protein | VEIS_RS12850 | Not Available | Positive | 2984546 - 2984944 | 14205.3 |
| iron-sulfur cluster insertion protein erpa | VEIS_RS12855 | A1WL78 | Positive | 2985006 - 2985371 | 12849.1 |
| anhydro-n-acetylmuramic acid kinase | VEIS_RS12860 | C5CM20 | Negative | 2985451 - 2986560 | 38083.6 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
