Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | VEIS_RS12630 | P39459 | Positive | 2932795 - 2933667 | 31229.1 |
| nitrite reductase large subunit nirb | VEIS_RS12635 | P42435 | Positive | 2933722 - 2936199 | 90155.3 |
| nitrite reductase small subunit nird | VEIS_RS12640 | Not Available | Positive | 2936225 - 2936647 | 15029.8 |
| nitrate reductase | VEIS_RS12645 | P39458 | Positive | 2936668 - 2939529 | 101788.0 |
| antitoxin xre/mbca/pars toxin-binding domain-containing protein | VEIS_RS12650 | A0A0C5XKJ0 | Positive | 2939566 - 2939853 | 9980.04 |
| tagatose 1,6-diphosphate aldolase | VEIS_RS12655 | Q8DWE5 | Positive | 2940099 - 2941145 | 38972.5 |
| amino acid abc transporter permease | VEIS_RS12660 | Not Available | Positive | 2941151 - 2941822 | 24028.8 |
| amino acid abc transporter permease | VEIS_RS12665 | P0AFT3 | Positive | 2941819 - 2942469 | 23860.8 |
| amino acid abc transporter atp-binding protein | VEIS_RS12670 | Not Available | Positive | 2942456 - 2943187 | 26044.0 |
| transporter substrate-binding domain-containing protein | VEIS_RS12675 | Not Available | Positive | 2943224 - 2944021 | 28874.2 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
