Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphogluconate dehydratase | VEIS_RS12525 | P31961 | Negative | 2902828 - 2904609 | 62394.0 |
| smp-30/gluconolactonase/lre family protein | VEIS_RS12530 | P0DOV6 | Positive | 2904708 - 2905607 | 32967.1 |
| nuclear transport factor 2 family protein | VEIS_RS12535 | Not Available | Positive | 2905878 - 2906276 | 14430.2 |
| 4-hydroxybenzoate 3-monooxygenase | VEIS_RS12540 | P20586 | Negative | 2906290 - 2907462 | 43312.9 |
| helix-turn-helix domain-containing protein | VEIS_RS12545 | Not Available | Positive | 2907771 - 2908745 | 35347.3 |
| hlyd family type i secretion periplasmic adaptor subunit | VEIS_RS12555 | P09986 | Negative | 2909232 - 2910674 | 53253.9 |
| type i secretion system permease/atpase | VEIS_RS12560 | P0DKX5 | Negative | 2910668 - 2912920 | 81311.3 |
| calcium-binding protein | VEIS_RS12565 | Not Available | Negative | 2913103 - 2917254 | 146304.0 |
| hypothetical protein | VEIS_RS24755 | Not Available | Negative | 2917256 - 2918152 | 34674.2 |
| chorismate synthase | VEIS_RS12575 | A1WL18 | Negative | 2918792 - 2919889 | 38897.3 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
