Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potd/potf family extracellular solute-binding protein | VEIS_RS12095 | Not Available | Negative | 2805648 - 2806949 | 47476.0 |
| abc transporter atp-binding protein | VEIS_RS12100 | Q5E586 | Negative | 2807045 - 2808115 | 38204.1 |
| hypothetical protein | VEIS_RS12105 | Not Available | Positive | 2808363 - 2808785 | 15131.8 |
| branched-chain amino acid transaminase | VEIS_RS12110 | O86428 | Positive | 2808828 - 2809769 | 34826.6 |
| zinc-finger domain-containing protein | VEIS_RS12115 | Not Available | Positive | 2809775 - 2809981 | 7329.84 |
| glycosyltransferase family 2 protein | VEIS_RS12120 | Q54435 | Positive | 2809985 - 2810797 | 30152.5 |
| o-antigen ligase | VEIS_RS12125 | Not Available | Positive | 2810794 - 2812041 | 45717.7 |
| glycosyltransferase | VEIS_RS12130 | Not Available | Positive | 2812058 - 2813101 | 39100.0 |
| nitronate monooxygenase family protein | VEIS_RS12135 | Q01284 | Negative | 2813277 - 2814164 | 31102.2 |
| is630 family transposase | VEIS_RS12140 | Not Available | Positive | 2814159 - 2815190 | 39532.4 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
