Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxo-tetronate isomerase | VEIS_RS12045 | Q0KBD1 | Positive | 2796818 - 2797618 | 29299.0 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS12050 | Not Available | Negative | 2797838 - 2798821 | 33757.6 |
| amidase | VEIS_RS12055 | Not Available | Negative | 2798877 - 2800361 | 52502.1 |
| endonuclease iii | VEIS_RS12060 | P44319 | Positive | 2800603 - 2801241 | 23196.3 |
| type ii toxin-antitoxin system death-on-curing family toxin | VEIS_RS12065 | Not Available | Negative | 2801317 - 2801718 | 14269.0 |
| abrb/maze/spovt family dna-binding domain-containing protein | VEIS_RS12070 | Not Available | Negative | 2801715 - 2801939 | 8361.18 |
| aspartate/glutamate racemase family protein | VEIS_RS12075 | Not Available | Negative | 2802103 - 2802855 | 25545.9 |
| gntr family transcriptional regulator | VEIS_RS12080 | Not Available | Negative | 2802885 - 2803556 | 24472.9 |
| abc transporter permease | VEIS_RS12085 | Not Available | Negative | 2803652 - 2804548 | 32133.2 |
| abc transporter permease | VEIS_RS12090 | Not Available | Negative | 2804550 - 2805461 | 33327.7 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
