Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease subunit | VEIS_RS11595 | Not Available | Positive | 2677781 - 2679574 | 64699.6 |
| dihydrodipicolinate synthase family protein | VEIS_RS11600 | A0B7E1 | Positive | 2679708 - 2680613 | 32097.6 |
| iclr family transcriptional regulator | VEIS_RS11605 | Not Available | Positive | 2680696 - 2681514 | 29657.5 |
| amino acid aminotransferase | VEIS_RS11610 | P72173 | Negative | 2681632 - 2682837 | 42869.5 |
| excinuclease abc subunit uvrb | VEIS_RS11615 | Q8Y0N2 | Positive | 2682954 - 2685098 | 81237.5 |
| fe-s cluster assembly transcriptional regulator iscr | VEIS_RS11620 | P0A0Z0 | Positive | 2685393 - 2685932 | 19590.7 |
| iscs subfamily cysteine desulfurase | VEIS_RS11625 | Q60C64 | Positive | 2686018 - 2687238 | 44850.0 |
| fe-s cluster assembly scaffold iscu | VEIS_RS11630 | P0ACD6 | Positive | 2687277 - 2687678 | 14016.8 |
| iron-sulfur cluster assembly protein isca | VEIS_RS11635 | B7UGX4 | Positive | 2687688 - 2688011 | 11831.1 |
| fe-s protein assembly co-chaperone hscb | VEIS_RS11640 | Q2SXE1 | Positive | 2688139 - 2688675 | 19908.5 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
