Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetoacetyl-coa reductase | VEIS_RS11500 | P14697 | Negative | 2649913 - 2650647 | 25938.0 |
| efflux rnd transporter periplasmic adaptor subunit | VEIS_RS11505 | P25196 | Positive | 2650985 - 2652139 | 40107.4 |
| efflux rnd transporter permease subunit | VEIS_RS11510 | P25197 | Positive | 2652146 - 2655358 | 117200.0 |
| protein-l-isoaspartate o-methyltransferase | VEIS_RS11515 | Q1INS6 | Positive | 2655464 - 2656177 | 25587.0 |
| rhodanese-like domain-containing protein | VEIS_RS11520 | Not Available | Positive | 2656219 - 2656554 | 12085.5 |
| tolc family outer membrane protein | VEIS_RS11525 | Q9K2Y1 | Positive | 2656712 - 2658052 | 47579.4 |
| sdr family oxidoreductase | VEIS_RS11530 | Q9ZW03 | Positive | 2658547 - 2659335 | 27654.3 |
| paai family thioesterase | VEIS_RS11535 | Not Available | Positive | 2659474 - 2659905 | 15642.9 |
| nadp-dependent oxidoreductase | VEIS_RS11540 | P76113 | Positive | 2660002 - 2661021 | 36108.1 |
| cytochrome c | VEIS_RS11545 | Not Available | Negative | 2661242 - 2661910 | 23801.5 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
