Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein ybib | VEIS_RS11225 | Q1IZP8 | Negative | 2601206 - 2602129 | 32839.3 |
| hypothetical protein | VEIS_RS28645 | Not Available | Negative | 2602699 - 2602971 | 10023.0 |
| sulfatase | VEIS_RS11230 | Q571E4 | Negative | 2603032 - 2604360 | 48832.9 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS11235 | Q45389 | Negative | 2604389 - 2605339 | 33577.8 |
| methyl-accepting chemotaxis protein | VEIS_RS31130 | P02941 | Positive | 2605806 - 2607560 | 61197.1 |
| alpha/beta hydrolase | VEIS_RS11245 | Not Available | Negative | 2607609 - 2608280 | 24127.3 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | VEIS_RS11250 | P45388 | Negative | 2608436 - 2608858 | 15356.6 |
| type ii 3-dehydroquinate dehydratase | VEIS_RS11255 | A1W6C8 | Negative | 2608899 - 2609357 | 16099.4 |
| Trna-met | Not Available | Not Available | Positive | 2609490 - 2609566 | Not Available |
| 50s ribosomal protein l17 | VEIS_RS11265 | A1WK91 | Negative | 2609596 - 2609997 | 15082.6 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
