Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta | VEIS_RS11075 | A1WK55 | Positive | 2563115 - 2567227 | 153039.0 |
| dna-directed rna polymerase subunit beta' | VEIS_RS11080 | A1WK56 | Positive | 2567249 - 2571484 | 155027.0 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | VEIS_RS11085 | Q9KVU5 | Positive | 2571572 - 2572900 | 47868.9 |
| duf4390 domain-containing protein | VEIS_RS11090 | Not Available | Positive | 2572950 - 2573561 | 22724.3 |
| atp-binding protein | VEIS_RS11095 | Q04850 | Positive | 2573558 - 2575852 | 82159.7 |
| response regulator | VEIS_RS11100 | Q1RJS1 | Positive | 2575893 - 2576567 | 24460.3 |
| l-rhamnose mutarotase | VEIS_RS11105 | Not Available | Negative | 2576660 - 2576989 | 12977.4 |
| mandelate racemase/muconate lactonizing enzyme family protein | VEIS_RS11110 | A6VRA1 | Negative | 2577007 - 2578116 | 40238.8 |
| maoc/paaz c-terminal domain-containing protein | VEIS_RS11115 | Not Available | Negative | 2578119 - 2578565 | 16975.3 |
| extracellular solute-binding protein | VEIS_RS11120 | Not Available | Positive | 2578772 - 2579899 | 41541.1 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
