Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rlme family rna methyltransferase | VEIS_RS01050 | A1WEE7 | Negative | 233243 - 233971 | 26247.8 |
| yhby family rna-binding protein | VEIS_RS01055 | Not Available | Positive | 234004 - 234480 | 17716.8 |
| hypothetical protein | VEIS_RS01060 | Not Available | Positive | 234477 - 235235 | 28900.7 |
| lysr substrate-binding domain-containing protein | VEIS_RS01065 | Not Available | Negative | 235347 - 236324 | 35186.0 |
| hypothetical protein | VEIS_RS29485 | Not Available | Negative | 236527 - 236703 | 6431.06 |
| porin | VEIS_RS29490 | P24305 | Positive | 236685 - 237170 | 16255.1 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS30120 | Not Available | Positive | 237228 - 238391 | 39927.5 |
| caib/baif coa-transferase family protein | VEIS_RS01080 | Q7TNE1 | Positive | 238388 - 239488 | 38554.4 |
| serine hydrolase | VEIS_RS01085 | Not Available | Positive | 239527 - 240630 | 39260.2 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS30125 | Not Available | Negative | 240810 - 240917 | 3869.8 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
