Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | VEIS_RS10355 | Q92S10 | Positive | 2409614 - 2411131 | 54247.3 |
| abc transporter permease | VEIS_RS10360 | A4WER3 | Positive | 2411128 - 2412198 | 37493.1 |
| abc transporter permease | VEIS_RS10365 | B1XEA3 | Positive | 2412195 - 2413157 | 33722.9 |
| l-rhamnose mutarotase | VEIS_RS10370 | A1WJR4 | Positive | 2413154 - 2413474 | 12196.9 |
| fggy-family carbohydrate kinase | VEIS_RS24725 | Not Available | Positive | 2413514 - 2414995 | 52242.5 |
| fatty acid desaturase | VEIS_RS30460 | A6T526 | Positive | 2415010 - 2417307 | 85017.7 |
| hypothetical protein | VEIS_RS10385 | Not Available | Positive | 2417558 - 2418481 | 34149.4 |
| abc transporter permease | VEIS_RS10390 | P38044 | Negative | 2418486 - 2419253 | 27289.1 |
| abc transporter atp-binding protein | VEIS_RS10395 | Q1C2S1 | Negative | 2419265 - 2420119 | 31944.1 |
| abc transporter substrate-binding protein | VEIS_RS10400 | Not Available | Negative | 2420237 - 2421262 | 36351.1 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
