Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase ii | VEIS_RS10310 | Q125P4 | Positive | 2399440 - 2399943 | 18241.3 |
| acyclic terpene utilization atua family protein | VEIS_RS10315 | Not Available | Positive | 2400082 - 2401437 | 48841.6 |
| hypothetical protein | VEIS_RS10320 | Not Available | Positive | 2401448 - 2401819 | 13636.4 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS10325 | Not Available | Positive | 2401816 - 2402772 | 33864.4 |
| lysr family transcriptional regulator | VEIS_RS10330 | Not Available | Negative | 2402769 - 2403692 | 34551.0 |
| bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase | VEIS_RS10335 | P40747 | Positive | 2403964 - 2406072 | 75624.6 |
| l-rhamnose catabolism isomerase | VEIS_RS10340 | Q92S14 | Positive | 2406125 - 2407411 | 46522.9 |
| substrate-binding domain-containing protein | VEIS_RS31330 | Not Available | Positive | 2407487 - 2407918 | 14962.1 |
| substrate-binding domain-containing protein | VEIS_RS10345 | Not Available | Positive | 2407821 - 2408504 | 24139.1 |
| rhamnose abc transporter substrate-binding protein | VEIS_RS10350 | B1IRU4 | Positive | 2408592 - 2409611 | 35556.0 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
