Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS09820 | Not Available | Negative | 2277853 - 2278890 | 36067.7 |
| mfs transporter | VEIS_RS09825 | Not Available | Negative | 2279038 - 2280234 | 42102.7 |
| acyl-coa dehydrogenase | VEIS_RS09830 | A0R4Z9 | Negative | 2280372 - 2282873 | 88646.6 |
| citryl-coa lyase | VEIS_RS09835 | Not Available | Positive | 2283081 - 2283866 | 27552.4 |
| sugar-binding transcriptional regulator | VEIS_RS09840 | P39140 | Positive | 2284179 - 2285207 | 36247.1 |
| abc transporter substrate-binding protein | VEIS_RS09845 | A0QXD9 | Positive | 2285200 - 2286642 | 52893.6 |
| carbohydrate abc transporter permease | VEIS_RS09850 | P55602 | Positive | 2286758 - 2287690 | 34938.8 |
| carbohydrate abc transporter permease | VEIS_RS09855 | Not Available | Positive | 2287713 - 2288570 | 31397.9 |
| abc transporter atp-binding protein | VEIS_RS09860 | A3PRY1 | Positive | 2288586 - 2289674 | 39109.7 |
| abc transporter atp-binding protein | VEIS_RS09865 | D4GP39 | Positive | 2289688 - 2290875 | 42297.1 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
