Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6963 family protein | VEIS_RS09775 | Not Available | Positive | 2268857 - 2269783 | 31510.8 |
| tetr/acrr family transcriptional regulator | VEIS_RS09780 | Not Available | Positive | 2269770 - 2270429 | 24628.7 |
| thiamine pyrophosphate-binding protein | VEIS_RS25945 | Not Available | Positive | 2270426 - 2270929 | 17813.8 |
| d-amino acid dehydrogenase | VEIS_RS09790 | Not Available | Positive | 2270942 - 2272192 | 44992.7 |
| abc transporter substrate-binding protein | VEIS_RS09795 | P55669 | Positive | 2272262 - 2273845 | 57644.9 |
| abc transporter permease | VEIS_RS09800 | Not Available | Positive | 2273847 - 2274794 | 34045.2 |
| abc transporter permease | VEIS_RS09805 | Not Available | Positive | 2274802 - 2275698 | 31257.2 |
| abc transporter atp-binding protein | VEIS_RS09810 | Q6D3A9 | Positive | 2275701 - 2277359 | 60002.3 |
| hypothetical protein | VEIS_RS28500 | Not Available | Positive | 2277356 - 2277562 | 6889.55 |
| hypothetical protein | VEIS_RS28505 | Not Available | Positive | 2277570 - 2277812 | 7852.54 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
