Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS30115 | Not Available | Positive | 212513 - 212706 | 6560.9 |
| s-adenosylmethionine decarboxylase | VEIS_RS25140 | Not Available | Positive | 212707 - 213051 | 12462.3 |
| nucleotidyltransferase family protein | VEIS_RS00965 | Q88QT2 | Positive | 213198 - 213932 | 26033.3 |
| aminopeptidase p n-terminal domain-containing protein | VEIS_RS00970 | P15034 | Positive | 214101 - 215501 | 50970.7 |
| pyruvate kinase | VEIS_RS00975 | Q8ZNW0 | Positive | 215569 - 217005 | 50723.6 |
| phosphatase pap2 family protein | VEIS_RS00980 | Not Available | Negative | 217010 - 217858 | 29484.4 |
| lysr family transcriptional regulator | VEIS_RS00985 | Q00678 | Negative | 218148 - 219041 | 32391.6 |
| abc transporter substrate-binding protein | VEIS_RS00990 | Not Available | Positive | 219162 - 220199 | 37589.2 |
| abc transporter atp-binding protein | VEIS_RS00995 | Q8RGC8 | Positive | 220278 - 221321 | 36752.5 |
| abc transporter permease | VEIS_RS01000 | P0AFK4 | Positive | 221318 - 222184 | 31460.8 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
