Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage holin family protein | VEIS_RS09470 | Not Available | Negative | 2172169 - 2172564 | 14880.4 |
| yqjd family protein | VEIS_RS09475 | Not Available | Negative | 2172598 - 2172927 | 11706.8 |
| aldehyde dehydrogenase family protein | VEIS_RS09480 | Not Available | Negative | 2173154 - 2174659 | 53612.7 |
| phytanoyl-coa dioxygenase family protein | VEIS_RS25905 | Not Available | Positive | 2175064 - 2175741 | 24956.2 |
| dmt family transporter | VEIS_RS09490 | Not Available | Positive | 2175723 - 2176670 | 33587.0 |
| gmc family oxidoreductase | VEIS_RS09500 | Q6LGH5 | Negative | 2177073 - 2178674 | 58143.0 |
| abc transporter permease | VEIS_RS09505 | Not Available | Negative | 2178682 - 2179545 | 30985.8 |
| abc transporter permease | VEIS_RS09510 | Not Available | Negative | 2179548 - 2180432 | 32268.3 |
| abc transporter atp-binding protein | VEIS_RS09515 | Not Available | Negative | 2180429 - 2181544 | 39865.5 |
| hypothetical protein | VEIS_RS09520 | Not Available | Positive | 2182538 - 2183356 | 30646.3 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
