Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | VEIS_RS09320 | Not Available | Positive | 2136205 - 2136966 | 26570.7 |
| abc transporter atp-binding protein | VEIS_RS09325 | Not Available | Positive | 2137017 - 2137727 | 25517.5 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS09330 | Not Available | Positive | 2137755 - 2138711 | 32857.0 |
| 3-isopropylmalate dehydratase large subunit | VEIS_RS09335 | Q8TVF2 | Positive | 2138708 - 2139994 | 45473.7 |
| 3-isopropylmalate dehydratase small subunit | VEIS_RS09340 | B9L5K2 | Positive | 2139991 - 2140509 | 18292.3 |
| hydantoinase b/oxoprolinase family protein | VEIS_RS09345 | Q01263 | Positive | 2140502 - 2142211 | 60052.4 |
| hydantoinase/oxoprolinase family protein | VEIS_RS09350 | Q01262 | Positive | 2142208 - 2144262 | 72539.6 |
| cysteine hydrolase family protein | VEIS_RS09355 | Not Available | Positive | 2144259 - 2144927 | 22966.7 |
| fad-dependent oxidoreductase | VEIS_RS09360 | Not Available | Positive | 2144924 - 2146339 | 48385.1 |
| oxaloacetate decarboxylase | VEIS_RS09365 | Q9YFM7 | Positive | 2146336 - 2147199 | 31214.5 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
