Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS00910 | Not Available | Positive | 202861 - 203862 | 35376.1 |
| fad-binding oxidoreductase | VEIS_RS00915 | P44732 | Negative | 203880 - 205184 | 46724.1 |
| amino acid abc transporter atp-binding protein | VEIS_RS00920 | P37774 | Negative | 205194 - 205925 | 26414.2 |
| amino acid abc transporter permease | VEIS_RS00925 | P42399 | Negative | 205922 - 206572 | 23525.9 |
| abc transporter substrate-binding protein | VEIS_RS00930 | Not Available | Negative | 206638 - 207399 | 27019.9 |
| helix-turn-helix domain-containing protein | VEIS_RS00935 | Not Available | Negative | 207500 - 208126 | 22771.6 |
| hypothetical protein | VEIS_RS27990 | Not Available | Negative | 208358 - 208534 | 6500.12 |
| antibiotic biosynthesis monooxygenase | VEIS_RS00940 | Not Available | Negative | 208534 - 208896 | 13585.9 |
| type i glyceraldehyde-3-phosphate dehydrogenase | VEIS_RS00945 | P52694 | Negative | 209263 - 210264 | 36031.0 |
| transketolase | VEIS_RS00950 | P27302 | Negative | 210314 - 212395 | 74596.2 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
