Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | VEIS_RS09040 | P40332 | Negative | 2070899 - 2071924 | 36538.4 |
| phytanoyl-coa dioxygenase family protein | VEIS_RS09045 | Not Available | Negative | 2071940 - 2073115 | 43068.1 |
| laci family dna-binding transcriptional regulator | VEIS_RS09050 | Not Available | Positive | 2073270 - 2074301 | 37379.1 |
| hypothetical protein | VEIS_RS09055 | Not Available | Negative | 2074366 - 2074836 | 17323.1 |
| hypothetical protein | VEIS_RS31320 | Not Available | Negative | 2074833 - 2075210 | 13551.5 |
| integrase arm-type dna-binding domain-containing protein | VEIS_RS09060 | P39347 | Negative | 2075222 - 2075821 | 22521.3 |
| Trna-arg | Not Available | Not Available | Positive | 2076006 - 2076082 | Not Available |
| lysr family transcriptional regulator | VEIS_RS09070 | Q04778 | Negative | 2076417 - 2077385 | 35892.6 |
| carboxymuconolactone decarboxylase family protein | VEIS_RS09075 | Not Available | Positive | 2077486 - 2078313 | 29285.6 |
| dmt family transporter | VEIS_RS09080 | P37511 | Positive | 2078552 - 2079475 | 32268.6 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
