Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dicarboxylate/amino acid:cation symporter | VEIS_RS08985 | A1WIY6 | Positive | 2056755 - 2058074 | 46600.6 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS08990 | Not Available | Negative | 2058260 - 2061098 | 101224.0 |
| hypothetical protein | VEIS_RS08995 | Not Available | Positive | 2061139 - 2061456 | 11187.5 |
| homoserine kinase | VEIS_RS09000 | A1VMB2 | Positive | 2061472 - 2062422 | 34851.2 |
| phox family phosphatase | VEIS_RS09005 | Not Available | Negative | 2062555 - 2064789 | 78342.7 |
| amino acid permease | VEIS_RS09010 | O74537 | Positive | 2065075 - 2066643 | 55924.3 |
| uracil-dna glycosylase | VEIS_RS09015 | Q21SE9 | Negative | 2066649 - 2067371 | 25673.0 |
| marr family winged helix-turn-helix transcriptional regulator | VEIS_RS09025 | Not Available | Negative | 2068207 - 2068743 | 20428.8 |
| alpha/beta fold hydrolase | VEIS_RS09030 | D4AV38 | Positive | 2068925 - 2069812 | 32170.2 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS09035 | Not Available | Positive | 2069837 - 2070826 | 35026.5 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
