Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetate--coa ligase family protein | VEIS_RS08830 | O29057 | Negative | 2017354 - 2019486 | 74584.2 |
| acyl-coa dehydrogenase family protein | VEIS_RS08835 | O34421 | Negative | 2019512 - 2020657 | 41282.8 |
| iclr family transcriptional regulator | VEIS_RS08840 | Not Available | Negative | 2020700 - 2021464 | 27103.9 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS08845 | Not Available | Positive | 2021655 - 2022635 | 34414.9 |
| zn-ribbon domain-containing ob-fold protein | VEIS_RS08850 | Not Available | Positive | 2022683 - 2023132 | 15629.9 |
| thiolase family protein | VEIS_RS08855 | Not Available | Positive | 2023129 - 2024382 | 43776.4 |
| enoyl-coa hydratase/isomerase family protein | VEIS_RS08860 | P52046 | Positive | 2024408 - 2025214 | 29028.2 |
| sdr family nad(p)-dependent oxidoreductase | VEIS_RS08865 | Not Available | Positive | 2025259 - 2026074 | 27893.8 |
| atp-binding protein | VEIS_RS08870 | Not Available | Positive | 2026181 - 2032303 | 228914.0 |
| hypothetical protein | VEIS_RS08875 | Not Available | Positive | 2032351 - 2033409 | 39290.6 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
