Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase family protein | VEIS_RS27985 | Not Available | Positive | 196370 - 196630 | 9258.13 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS00870 | Q7WQW5 | Positive | 196603 - 196905 | 10967.3 |
| duf6364 family protein | VEIS_RS00875 | Not Available | Positive | 196971 - 197228 | 9522.52 |
| pin domain-containing protein | VEIS_RS00880 | Not Available | Positive | 197234 - 197632 | 14363.4 |
| lysr substrate-binding domain-containing protein | VEIS_RS00885 | P0ACR7 | Negative | 197646 - 198557 | 32391.5 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS00890 | Not Available | Positive | 198761 - 199747 | 33994.0 |
| gntr family transcriptional regulator | VEIS_RS00895 | Not Available | Negative | 199734 - 200192 | 16736.7 |
| hypothetical protein | VEIS_RS29480 | Not Available | Positive | 200199 - 200357 | 5419.6 |
| aldehyde dehydrogenase | VEIS_RS00900 | B7GYG4 | Positive | 200391 - 201827 | 50531.6 |
| nad(p)-dependent oxidoreductase | VEIS_RS00905 | Q9L7S0 | Positive | 201916 - 202815 | 30824.4 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
