Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transaldolase | VEIS_RS08690 | A1WIS6 | Positive | 1986918 - 1987868 | 34342.2 |
| hypothetical protein | VEIS_RS08695 | Not Available | Positive | 1988188 - 1988688 | 17275.4 |
| carbohydrate porin | VEIS_RS08700 | Not Available | Positive | 1988691 - 1989878 | 41890.6 |
| hypothetical protein | VEIS_RS08705 | Not Available | Positive | 1990213 - 1990398 | 6521.52 |
| glucokinase | VEIS_RS08710 | Q5P8D4 | Positive | 1990501 - 1991514 | 34600.6 |
| s1c family serine protease | VEIS_RS08715 | Q9Z6T0 | Negative | 1991548 - 1992705 | 40056.0 |
| nif3-like dinuclear metal center hexameric protein | VEIS_RS08720 | Q8XVA0 | Positive | 1992822 - 1993580 | 26981.0 |
| is1182-like element isvei6 family transposase | VEIS_RS08725 | Not Available | Negative | 1993752 - 1995119 | 49381.9 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | VEIS_RS08730 | P37634 | Negative | 1995579 - 1996460 | 32141.8 |
| tetr/acrr family transcriptional regulator | VEIS_RS08735 | Not Available | Negative | 1996605 - 1997237 | 22858.3 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
