Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease subunit alpha | VEIS_RS08410 | A1WIM3 | Negative | 1923145 - 1924917 | 62243.5 |
| urease subunit beta | VEIS_RS08415 | A1WIM4 | Negative | 1925034 - 1925339 | 11029.2 |
| hupe/urej family protein | VEIS_RS08420 | Not Available | Negative | 1925361 - 1925957 | 19640.7 |
| urease subunit gamma | VEIS_RS08425 | A1WIM6 | Negative | 1926064 - 1926366 | 10835.4 |
| atp-binding protein | VEIS_RS08430 | P26762 | Positive | 1926570 - 1930157 | 129999.0 |
| response regulator | VEIS_RS08435 | Q9HV27 | Positive | 1930157 - 1931239 | 38524.6 |
| duf3334 family protein | VEIS_RS08440 | Not Available | Negative | 1931281 - 1931964 | 25025.1 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS31315 | Not Available | Negative | 1932028 - 1932193 | 6019.04 |
| acyl-coa dehydrogenase | VEIS_RS08445 | Q92947 | Positive | 1932532 - 1933728 | 42944.8 |
| caib/baif coa-transferase family protein | VEIS_RS08450 | Not Available | Positive | 1933856 - 1935142 | 44967.4 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
