Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | VEIS_RS00815 | Not Available | Positive | 185083 - 185850 | 27094.9 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS00820 | Not Available | Positive | 185856 - 186854 | 34192.6 |
| lysr substrate-binding domain-containing protein | VEIS_RS00825 | Not Available | Negative | 187003 - 187923 | 32890.3 |
| substrate-binding domain-containing protein | VEIS_RS00830 | A0A0A1H8I4 | Positive | 189060 - 189752 | 23988.2 |
| amidohydrolase family protein | VEIS_RS00835 | G2IQQ5 | Positive | 189797 - 190834 | 38609.3 |
| amidohydrolase family protein | VEIS_RS00840 | Not Available | Positive | 190985 - 191902 | 34075.6 |
| protocatechuate 4,5-dioxygenase subunit alpha/beta | VEIS_RS00845 | P22636 | Positive | 191965 - 193296 | 48377.8 |
| gfo/idh/moca family oxidoreductase | VEIS_RS00850 | Q9KWL3 | Positive | 193293 - 194246 | 34904.8 |
| mechanosensitive ion channel family protein | VEIS_RS00855 | Q58543 | Positive | 194313 - 195440 | 40299.4 |
| gntr family transcriptional regulator | VEIS_RS00860 | Not Available | Negative | 195485 - 196183 | 25411.0 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
