Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyse family translocator | VEIS_RS07990 | Q8Z3B3 | Negative | 1823564 - 1824202 | 22707.9 |
| tolc family outer membrane protein | VEIS_RS07995 | P23598 | Negative | 1824295 - 1825635 | 48988.0 |
| hlyd family type i secretion periplasmic adaptor subunit | VEIS_RS08000 | Q03025 | Negative | 1825639 - 1827000 | 49609.1 |
| type i secretion system permease/atpase | VEIS_RS08005 | Not Available | Negative | 1827065 - 1828834 | 63779.4 |
| type i secretion system permease/atpase | VEIS_RS08010 | Q03024 | Negative | 1828835 - 1830568 | 61724.8 |
| nadp-dependent malic enzyme | VEIS_RS08020 | P76558 | Positive | 1831302 - 1833626 | 83953.9 |
| dna polymerase iv | VEIS_RS08025 | A3CSG3 | Negative | 1833669 - 1834907 | 45331.1 |
| oxalurate catabolism protein hpxz | VEIS_RS08030 | Not Available | Negative | 1835069 - 1835446 | 14152.8 |
| cysteine hydrolase family protein | VEIS_RS30360 | Not Available | Negative | 1835443 - 1836288 | 30107.4 |
| archaetidylserine decarboxylase | VEIS_RS08040 | A1WIF0 | Positive | 1836545 - 1837405 | 30930.6 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
