Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | VEIS_RS07790 | Not Available | Positive | 1785412 - 1785744 | 11164.4 |
| cytochrome c family protein | VEIS_RS07795 | P04657 | Positive | 1785741 - 1786118 | 13093.0 |
| abc transporter substrate-binding protein | VEIS_RS07800 | A8ZWR8 | Positive | 1786844 - 1787620 | 27604.3 |
| amino acid abc transporter permease | VEIS_RS07805 | Not Available | Positive | 1787642 - 1788424 | 28149.0 |
| amino acid abc transporter atp-binding protein | VEIS_RS07810 | P45769 | Positive | 1788421 - 1789164 | 27465.4 |
| dcap family trimeric outer membrane transporter | VEIS_RS07815 | Not Available | Positive | 1789229 - 1790530 | 47042.9 |
| dmt family transporter | VEIS_RS07820 | Not Available | Positive | 1790591 - 1791484 | 32108.0 |
| penicillin-binding protein 2 | VEIS_RS07825 | P44469 | Negative | 1791494 - 1793446 | 70490.4 |
| rod shape-determining protein mred | VEIS_RS07830 | Not Available | Negative | 1793471 - 1793989 | 18418.4 |
| rod shape-determining protein mrec | VEIS_RS07835 | Not Available | Negative | 1794018 - 1794953 | 33818.0 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
