Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | VEIS_RS07605 | Not Available | Positive | 1746289 - 1747137 | 29620.4 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS07610 | Not Available | Positive | 1747533 - 1748501 | 33370.9 |
| nad/nadp-dependent octopine/nopaline dehydrogenase family protein | VEIS_RS07615 | Not Available | Positive | 1748507 - 1749589 | 38062.4 |
| hypothetical protein | VEIS_RS07620 | Not Available | Positive | 1749718 - 1749939 | 7925.56 |
| n-6 dna methylase | VEIS_RS07625 | Q58617 | Positive | 1750234 - 1752081 | 67597.4 |
| restriction endonuclease subunit s | VEIS_RS07630 | P10485 | Positive | 1752081 - 1753289 | 43641.1 |
| virulence rhum family protein | VEIS_RS07635 | Not Available | Positive | 1753286 - 1754356 | 40294.2 |
| type i restriction endonuclease subunit r | VEIS_RS07640 | O05052 | Positive | 1754362 - 1757310 | 110567.0 |
| m48 family metallopeptidase | VEIS_RS07645 | Not Available | Positive | 1757307 - 1757618 | 11915.6 |
| comec/rec2 family competence protein | VEIS_RS07650 | Not Available | Positive | 1757634 - 1758452 | 30491.2 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
