Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease activity regulator rraa | VEIS_RS07560 | Not Available | Positive | 1739010 - 1739720 | 24509.5 |
| hypothetical protein | VEIS_RS07565 | Not Available | Negative | 1739721 - 1740110 | 13751.3 |
| glutamyl-trna reductase | VEIS_RS07570 | A1WI55 | Positive | 1740109 - 1741398 | 45984.6 |
| peptide chain release factor 1 | VEIS_RS07575 | A1WI56 | Positive | 1741520 - 1742599 | 40059.6 |
| hypothetical protein | VEIS_RS28395 | Not Available | Positive | 1742698 - 1743042 | 12251.9 |
| peptide chain release factor n(5)-glutamine methyltransferase | VEIS_RS07585 | Q8PC99 | Positive | 1743009 - 1743893 | 30748.9 |
| grx4 family monothiol glutaredoxin | VEIS_RS07590 | P73056 | Positive | 1743958 - 1744275 | 11606.2 |
| aaa family atpase | VEIS_RS07595 | Q72KS4 | Positive | 1744404 - 1745411 | 36938.2 |
| helix-turn-helix domain-containing protein | VEIS_RS07600 | Not Available | Negative | 1745641 - 1745928 | 10276.3 |
| type ii toxin-antitoxin system rele/pare family toxin | VEIS_RS29670 | Not Available | Negative | 1745925 - 1746152 | 8325.15 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
