Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside-diphosphate reductase subunit alpha | VEIS_RS07285 | O84834 | Negative | 1670526 - 1673432 | 107431.0 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | VEIS_RS07290 | P82974 | Negative | 1673661 - 1674260 | 22078.0 |
| sigma-54 dependent transcriptional regulator | VEIS_RS07295 | Q00934 | Negative | 1674244 - 1675746 | 54637.4 |
| atp-binding protein | VEIS_RS07300 | P33639 | Negative | 1675758 - 1677455 | 61832.0 |
| pp0621 family protein | VEIS_RS07305 | Not Available | Negative | 1677466 - 1677696 | 8172.2 |
| inner membrane protein ypjd | VEIS_RS07310 | Not Available | Negative | 1677693 - 1678484 | 28328.3 |
| signal recognition particle protein | VEIS_RS07315 | P0AGD9 | Positive | 1678525 - 1679889 | 49074.7 |
| pilus assembly protein | VEIS_RS07320 | Q87E25 | Negative | 1679964 - 1684688 | 168374.0 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | VEIS_RS07325 | A1TUE2 | Positive | 1685122 - 1686570 | 50280.6 |
| atp-binding protein | VEIS_RS07330 | Not Available | Positive | 1686567 - 1687400 | 29076.2 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
